FHIR Implementation Guide for PUBLIC Testing
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ValueSet: OS LAB Microbiology Report

Official URL: https://fhir.osbornemj.com/ig/ValueSet/vs-OSLAB-microbiology-report Version: 0.1.0
Draft as of 2026-02-28 Maturity Level: 0 Computable Name: OSLABMicrobiologyOrdersVS

The OS LAB Microbiology Report value set includes codes for Microbiology reports, for example URINE - Urine M/C/S.

References

Logical Definition (CLD)

 

Expansion

Expansion performed internally based on codesystem OS LAB Microbiology Reports v0.1.0 (CodeSystem)

This value set contains 23 concepts

SystemCodeDisplay (en)DefinitionJSONXML
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  ADFUNGFungal Culture (M/C/S)Fungal Culture (M/C/S)
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  BCBlood Culture (M/C/S)Blood Culture (M/C/S)
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  CASCandida auris Screen CultureCandida auris Screen Culture
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  CSFCSF Culture (M/C/S)CSF Culture (M/C/S)
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  CSFSCSF Subarachnoid Culture (M/C/S)CSF Subarachnoid Culture (M/C/S)
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  ENTEar, Nose, Throat and Conjunctival SwabEar, Nose, Throat and Conjunctival Swab
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  EYEEye Invasive Culture (M/C/S)Eye Invasive Culture (M/C/S)
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  FAEMICFaeces Microscopy (RBC,WBC) OnlyFaeces Microscopy (RBC,WBC) Only
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  FLBCMSterile Fluid Culture in Blood Culture MSterile Fluid Culture in Blood Culture M
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  FLPLUSSterile Fluid Culture plus Fluid in BlooSterile Fluid Culture plus Fluid in Bloo
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  FLUIDSterile Fluid Culture (M/C/S)Sterile Fluid Culture (M/C/S)
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  FUNGISkin, Hair, Nail Dermatophyte Culture (MSkin, Hair, Nail Dermatophyte Culture (M
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  GBSGroup B Streptococcus Culture Screen (M/Group B Streptococcus Culture Screen (M/
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  GENITGenital Swab Culture (M/C/S)Genital Swab Culture (M/C/S)
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  MRSAMRSA Screen CultureMRSA Screen Culture
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  PUSDeep Invasive Pus or Swab Culture (M/C/SDeep Invasive Pus or Swab Culture (M/C/S
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  RESPRespiratory Sputum or ETT Culture (M/C/SRespiratory Sputum or ETT Culture (M/C/S
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  RESPFRespiratory Bronchoscopic Collection CulRespiratory Bronchoscopic Collection Cul
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  SITESuperficial Pus or Swab Culture (M/C/S)Superficial Pus or Swab Culture (M/C/S)
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  TIPTip Culture (M/C/S)Tip Culture (M/C/S)
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  TISTissue Culture (M/C/S)Tissue Culture (M/C/S)
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  URINEUrine Culture (M/C/S)Urine Culture (M/C/S)
https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports  VRESVRE Screen CultureVRE Screen Culture

Explanation of the columns that may appear on this page:

Level A few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies
System The source of the definition of the code (when the value set draws in codes defined elsewhere)
Code The code (used as the code in the resource instance)
Display The display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application
Definition An explanation of the meaning of the concept
Comments Additional notes about how to use the code