FHIR Implementation Guide for PUBLIC Testing
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CodeSystem: OS LAB Microbiology Reports

Official URL: https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports Version: 0.1.0
Draft as of 2026-02-28 Maturity Level: 0 Computable Name: OSLABMicrobiologyReportsCS

The OS LAB Microbiology Reports code system includes codes for reporting of microbiology results.

This Code system is referenced in the content logical definition of the following value sets:

This case-insensitive code system https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports defines the following codes:

CodeDisplayDefinition
ADFUNG Fungal Culture (M/C/S) Fungal Culture (M/C/S)
BC Blood Culture (M/C/S) Blood Culture (M/C/S)
CAS Candida auris Screen Culture Candida auris Screen Culture
CSF CSF Culture (M/C/S) CSF Culture (M/C/S)
CSFS CSF Subarachnoid Culture (M/C/S) CSF Subarachnoid Culture (M/C/S)
ENT Ear, Nose, Throat and Conjunctival Swab Ear, Nose, Throat and Conjunctival Swab
EYE Eye Invasive Culture (M/C/S) Eye Invasive Culture (M/C/S)
FAEMIC Faeces Microscopy (RBC,WBC) Only Faeces Microscopy (RBC,WBC) Only
FLBCM Sterile Fluid Culture in Blood Culture M Sterile Fluid Culture in Blood Culture M
FLPLUS Sterile Fluid Culture plus Fluid in Bloo Sterile Fluid Culture plus Fluid in Bloo
FLUID Sterile Fluid Culture (M/C/S) Sterile Fluid Culture (M/C/S)
FUNGI Skin, Hair, Nail Dermatophyte Culture (M Skin, Hair, Nail Dermatophyte Culture (M
GBS Group B Streptococcus Culture Screen (M/ Group B Streptococcus Culture Screen (M/
GENIT Genital Swab Culture (M/C/S) Genital Swab Culture (M/C/S)
MRSA MRSA Screen Culture MRSA Screen Culture
PUS Deep Invasive Pus or Swab Culture (M/C/S Deep Invasive Pus or Swab Culture (M/C/S
RESP Respiratory Sputum or ETT Culture (M/C/S Respiratory Sputum or ETT Culture (M/C/S
RESPF Respiratory Bronchoscopic Collection Cul Respiratory Bronchoscopic Collection Cul
SITE Superficial Pus or Swab Culture (M/C/S) Superficial Pus or Swab Culture (M/C/S)
TIP Tip Culture (M/C/S) Tip Culture (M/C/S)
TIS Tissue Culture (M/C/S) Tissue Culture (M/C/S)
URINE Urine Culture (M/C/S) Urine Culture (M/C/S)
VRES VRE Screen Culture VRE Screen Culture