{ "resourceType" : "CodeSystem", "id" : "oslab-specimens", "meta" : { "profile" : ["http://hl7.org/fhir/StructureDefinition/shareablecodesystem"] }, "text" : { "status" : "generated", "div" : "

Generated Narrative: CodeSystem oslab-specimens

Profile: Shareable CodeSystem

This case-insensitive code system https://fhir.osbornemj.com/ig/CodeSystem/oslab-specimens defines the following codes:

CodeDisplayDefinition
Swab SwabSwab
Tissue Tissue specimenTissue specimen
LeftNeckTissue Tissue specimenTissue specimen
Fluid Fluid sampleFluid sample
AsciticFluid Ascitic fluidAscitic fluid
Mesh MeshMesh
Pus Pus specimenPus specimen
Blood Blood specimenBlood specimen
Urine Urine specimenUrine specimen
Tip Specimen from drain tipSpecimen from drain tip
Washing Specimen obtained by lavageSpecimen obtained by lavage
Washings Specimen obtained by lavageSpecimen obtained by lavage
Lavage Specimen obtained by lavageSpecimen obtained by lavage
Bone Specimen from boneSpecimen from bone
Aspirate Specimen obtained by aspirationSpecimen obtained by aspiration
Sputum Sputum specimenSputum specimen
Isolate Microbial isolateMicrobial isolate
Faeces Faeces specimenFaeces specimen
Drain Swab of building drainSwab of building drain
Shower Swab of building showerSwab of building shower
Sink Swab of building sinkSwab of building sink
Room Swab of building roomSwab of building room
Wound Specimen from woundSpecimen from wound
Device Specimen from deviceSpecimen from device
Burn Burn tissueBurn tissue
Abscess Specimen from abscessSpecimen from abscess
AbdominalAbscess Specimen from intra-abdominal abscessSpecimen from intra-abdominal abscess
AbdomenAbscess Specimen from intra-abdominal abscessSpecimen from intra-abdominal abscess
?Collection Specimen of unknown materialSpecimen of unknown material
" }, "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm", "valueInteger" : 0 }], "url" : "https://fhir.osbornemj.com/ig/CodeSystem/oslab-specimens", "version" : "0.1.0", "name" : "OSLABSpecimensCS", "title" : "OS LAB Microbiology Specimens CodeSystem", "status" : "draft", "experimental" : false, "date" : "2026-02-28", "publisher" : "Michael J Osborne", "contact" : [{ "name" : "Michael J Osborne", "telecom" : [{ "system" : "url", "value" : "http://osbornemj.com" }] }], "description" : "The OS Lab Microbiology Specimens CodeSystem includes codes for specimens for use in a Laboratory Observation.", "jurisdiction" : [{ "coding" : [{ "system" : "urn:iso:std:iso:3166", "code" : "AUS", "display" : "Australia" }] }], "caseSensitive" : false, "content" : "complete", "count" : 29, "concept" : [{ "code" : "Swab", "display" : "Swab", "definition" : "Swab" }, { "code" : "Tissue", "display" : "Tissue specimen", "definition" : "Tissue specimen" }, { "code" : "LeftNeckTissue", "display" : "Tissue specimen", "definition" : "Tissue specimen" }, { "code" : "Fluid", "display" : "Fluid sample", "definition" : "Fluid sample" }, { "code" : "AsciticFluid", "display" : "Ascitic fluid", "definition" : "Ascitic fluid" }, { "code" : "Mesh", "display" : "Mesh", "definition" : "Mesh" }, { "code" : "Pus", "display" : "Pus specimen", "definition" : "Pus specimen" }, { "code" : "Blood", "display" : "Blood specimen", "definition" : "Blood specimen" }, { "code" : "Urine", "display" : "Urine specimen", "definition" : "Urine specimen" }, { "code" : "Tip", "display" : "Specimen from drain tip", "definition" : "Specimen from drain tip" }, { "code" : "Washing", "display" : "Specimen obtained by lavage", "definition" : "Specimen obtained by lavage" }, { "code" : "Washings", "display" : "Specimen obtained by lavage", "definition" : "Specimen obtained by lavage" }, { "code" : "Lavage", "display" : "Specimen obtained by lavage", "definition" : "Specimen obtained by lavage" }, { "code" : "Bone", "display" : "Specimen from bone", "definition" : "Specimen from bone" }, { "code" : "Aspirate", "display" : "Specimen obtained by aspiration", "definition" : "Specimen obtained by aspiration" }, { "code" : "Sputum", "display" : "Sputum specimen", "definition" : "Sputum specimen" }, { "code" : "Isolate", "display" : "Microbial isolate", "definition" : "Microbial isolate" }, { "code" : "Faeces", "display" : "Faeces specimen", "definition" : "Faeces specimen" }, { "code" : "Drain", "display" : "Swab of building drain", "definition" : "Swab of building drain" }, { "code" : "Shower", "display" : "Swab of building shower", "definition" : "Swab of building shower" }, { "code" : "Sink", "display" : "Swab of building sink", "definition" : "Swab of building sink" }, { "code" : "Room", "display" : "Swab of building room", "definition" : "Swab of building room" }, { "code" : "Wound", "display" : "Specimen from wound", "definition" : "Specimen from wound" }, { "code" : "Device", "display" : "Specimen from device", "definition" : "Specimen from device" }, { "code" : "Burn", "display" : "Burn tissue", "definition" : "Burn tissue" }, { "code" : "Abscess", "display" : "Specimen from abscess", "definition" : "Specimen from abscess" }, { "code" : "AbdominalAbscess", "display" : "Specimen from intra-abdominal abscess", "definition" : "Specimen from intra-abdominal abscess" }, { "code" : "AbdomenAbscess", "display" : "Specimen from intra-abdominal abscess", "definition" : "Specimen from intra-abdominal abscess" }, { "code" : "?Collection", "display" : "Specimen of unknown material", "definition" : "Specimen of unknown material" }] }