<status value="draft"/> <experimental value="false"/> <date value="2026-02-28"/> <publisher value="Michael J Osborne"/> <contact> <name value="Michael J Osborne"/> <telecom> <system value="url"/> <value value="http://osbornemj.com"/> </telecom> </contact> <description value="The OS LAB Microbiology Reports code system includes codes for reporting of microbiology results."/> <jurisdiction> <coding> <system value="urn:iso:std:iso:3166"/> <code value="AUS"/> <display value="Australia"/> </coding> </jurisdiction> <caseSensitive value="false"/> <content value="complete"/> <count value="23"/> <concept> <code value="ADFUNG"/> <display value="Fungal Culture (M/C/S)"/> <definition value="Fungal Culture (M/C/S)"/> </concept> <concept> <code value="BC"/> <display value="Blood Culture (M/C/S)"/> <definition value="Blood Culture (M/C/S)"/> </concept> <concept> <code value="CAS"/> <display value="Candida auris Screen Culture"/> <definition value="Candida auris Screen Culture"/> </concept> <concept> <code value="CSF"/> <display value="CSF Culture (M/C/S)"/> <definition value="CSF Culture (M/C/S)"/> </concept> <concept> <code value="CSFS"/> <display value="CSF Subarachnoid Culture (M/C/S)"/> <definition value="CSF Subarachnoid Culture (M/C/S)"/> </concept> <concept> <code value="ENT"/> <display value="Ear, Nose, Throat and Conjunctival Swab"/> <definition value="Ear, Nose, Throat and Conjunctival Swab"/> </concept> <concept> <code value="EYE"/> <display value="Eye Invasive Culture (M/C/S)"/> <definition value="Eye Invasive Culture (M/C/S)"/> </concept> <concept> <code value="FAEMIC"/> <display value="Faeces Microscopy (RBC,WBC) Only"/> <definition value="Faeces Microscopy (RBC,WBC) Only"/> </concept> <concept> <code value="FLBCM"/> <display value="Sterile Fluid Culture in Blood Culture M"/> <definition value="Sterile Fluid Culture in Blood Culture M"/> </concept> <concept> <code value="FLPLUS"/> <display value="Sterile Fluid Culture plus Fluid in Bloo"/> <definition value="Sterile Fluid Culture plus Fluid in Bloo"/> </concept> <concept> <code value="FLUID"/> <display value="Sterile Fluid Culture (M/C/S)"/> <definition value="Sterile Fluid Culture (M/C/S)"/> </concept> <concept> <code value="FUNGI"/> <display value="Skin, Hair, Nail Dermatophyte Culture (M"/> <definition value="Skin, Hair, Nail Dermatophyte Culture (M"/> </concept> <concept> <code value="GBS"/> <display value="Group B Streptococcus Culture Screen (M/"/> <definition value="Group B Streptococcus Culture Screen (M/"/> </concept> <concept> <code value="GENIT"/> <display value="Genital Swab Culture (M/C/S)"/> <definition value="Genital Swab Culture (M/C/S)"/> </concept> <concept> <code value="MRSA"/> <display value="MRSA Screen Culture"/> <definition value="MRSA Screen Culture"/> </concept> <concept> <code value="PUS"/> <display value="Deep Invasive Pus or Swab Culture (M/C/S"/> <definition value="Deep Invasive Pus or Swab Culture (M/C/S"/> </concept> <concept> <code value="RESP"/> <display value="Respiratory Sputum or ETT Culture (M/C/S"/> <definition value="Respiratory Sputum or ETT Culture (M/C/S"/> </concept> <concept> <code value="RESPF"/> <display value="Respiratory Bronchoscopic Collection Cul"/> <definition value="Respiratory Bronchoscopic Collection Cul"/> </concept> <concept> <code value="SITE"/> <display value="Superficial Pus or Swab Culture (M/C/S)"/> <definition value="Superficial Pus or Swab Culture (M/C/S)"/> </concept> <concept> <code value="TIP"/> <display value="Tip Culture (M/C/S)"/> <definition value="Tip Culture (M/C/S)"/> </concept> <concept> <code value="TIS"/> <display value="Tissue Culture (M/C/S)"/> <definition value="Tissue Culture (M/C/S)"/> </concept> <concept> <code value="URINE"/> <display value="Urine Culture (M/C/S)"/> <definition value="Urine Culture (M/C/S)"/> </concept> <concept> <code value="VRES"/> <display value="VRE Screen Culture"/> <definition value="VRE Screen Culture"/> </concept> </CodeSystem>

Generated Narrative: CodeSystem OSLAB-microbiology-reports

This case-insensitive code system https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports defines the following codes:

Code	Display	Definition
ADFUNG	Fungal Culture (M/C/S)	Fungal Culture (M/C/S)
BC	Blood Culture (M/C/S)	Blood Culture (M/C/S)
CAS	Candida auris Screen Culture	Candida auris Screen Culture
CSF	CSF Culture (M/C/S)	CSF Culture (M/C/S)
CSFS	CSF Subarachnoid Culture (M/C/S)	CSF Subarachnoid Culture (M/C/S)
ENT	Ear, Nose, Throat and Conjunctival Swab	Ear, Nose, Throat and Conjunctival Swab
EYE	Eye Invasive Culture (M/C/S)	Eye Invasive Culture (M/C/S)
FAEMIC	Faeces Microscopy (RBC,WBC) Only	Faeces Microscopy (RBC,WBC) Only
FLBCM	Sterile Fluid Culture in Blood Culture M	Sterile Fluid Culture in Blood Culture M
FLPLUS	Sterile Fluid Culture plus Fluid in Bloo	Sterile Fluid Culture plus Fluid in Bloo
FLUID	Sterile Fluid Culture (M/C/S)	Sterile Fluid Culture (M/C/S)
FUNGI	Skin, Hair, Nail Dermatophyte Culture (M	Skin, Hair, Nail Dermatophyte Culture (M
GBS	Group B Streptococcus Culture Screen (M/	Group B Streptococcus Culture Screen (M/
GENIT	Genital Swab Culture (M/C/S)	Genital Swab Culture (M/C/S)
MRSA	MRSA Screen Culture	MRSA Screen Culture
PUS	Deep Invasive Pus or Swab Culture (M/C/S	Deep Invasive Pus or Swab Culture (M/C/S
RESP	Respiratory Sputum or ETT Culture (M/C/S	Respiratory Sputum or ETT Culture (M/C/S
RESPF	Respiratory Bronchoscopic Collection Cul	Respiratory Bronchoscopic Collection Cul
SITE	Superficial Pus or Swab Culture (M/C/S)	Superficial Pus or Swab Culture (M/C/S)
TIP	Tip Culture (M/C/S)	Tip Culture (M/C/S)
TIS	Tissue Culture (M/C/S)	Tissue Culture (M/C/S)
URINE	Urine Culture (M/C/S)	Urine Culture (M/C/S)
VRES	VRE Screen Culture	VRE Screen Culture