@prefix fhir: . @prefix owl: . @prefix rdf: . @prefix rdfs: . @prefix xsd: . # - resource ------------------------------------------------------------------- a fhir:CodeSystem ; fhir:nodeRole fhir:treeRoot ; fhir:id [ fhir:v "OSLAB-microbiology-reports"] ; # fhir:meta [ fhir:profile ( [ fhir:v "http://hl7.org/fhir/StructureDefinition/shareablecodesystem"^^xsd:anyURI ; fhir:l ] ) ] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div [ fhir:v "

Generated Narrative: CodeSystem OSLAB-microbiology-reports

This case-insensitive code system https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports defines the following codes:

CodeDisplayDefinition
ADFUNG Fungal Culture (M/C/S)Fungal Culture (M/C/S)
BC Blood Culture (M/C/S)Blood Culture (M/C/S)
CAS Candida auris Screen CultureCandida auris Screen Culture
CSF CSF Culture (M/C/S)CSF Culture (M/C/S)
CSFS CSF Subarachnoid Culture (M/C/S)CSF Subarachnoid Culture (M/C/S)
ENT Ear, Nose, Throat and Conjunctival SwabEar, Nose, Throat and Conjunctival Swab
EYE Eye Invasive Culture (M/C/S)Eye Invasive Culture (M/C/S)
FAEMIC Faeces Microscopy (RBC,WBC) OnlyFaeces Microscopy (RBC,WBC) Only
FLBCM Sterile Fluid Culture in Blood Culture MSterile Fluid Culture in Blood Culture M
FLPLUS Sterile Fluid Culture plus Fluid in BlooSterile Fluid Culture plus Fluid in Bloo
FLUID Sterile Fluid Culture (M/C/S)Sterile Fluid Culture (M/C/S)
FUNGI Skin, Hair, Nail Dermatophyte Culture (MSkin, Hair, Nail Dermatophyte Culture (M
GBS Group B Streptococcus Culture Screen (M/Group B Streptococcus Culture Screen (M/
GENIT Genital Swab Culture (M/C/S)Genital Swab Culture (M/C/S)
MRSA MRSA Screen CultureMRSA Screen Culture
PUS Deep Invasive Pus or Swab Culture (M/C/SDeep Invasive Pus or Swab Culture (M/C/S
RESP Respiratory Sputum or ETT Culture (M/C/SRespiratory Sputum or ETT Culture (M/C/S
RESPF Respiratory Bronchoscopic Collection CulRespiratory Bronchoscopic Collection Cul
SITE Superficial Pus or Swab Culture (M/C/S)Superficial Pus or Swab Culture (M/C/S)
TIP Tip Culture (M/C/S)Tip Culture (M/C/S)
TIS Tissue Culture (M/C/S)Tissue Culture (M/C/S)
URINE Urine Culture (M/C/S)Urine Culture (M/C/S)
VRES VRE Screen CultureVRE Screen Culture
"^^rdf:XMLLiteral ] ] ; # fhir:extension ( [ fhir:url [ fhir:v "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm"^^xsd:anyURI ; fhir:l ] ; fhir:value [ a fhir:Integer ; fhir:v 0 ] ] ) ; # fhir:url [ fhir:v "https://fhir.osbornemj.com/ig/CodeSystem/OSLAB-microbiology-reports"^^xsd:anyURI ; fhir:l ] ; # fhir:version [ fhir:v "0.1.0"] ; # fhir:name [ fhir:v "OSLABMicrobiologyReportsCS"] ; # fhir:title [ fhir:v "OS LAB Microbiology Reports"] ; # fhir:status [ fhir:v "draft"] ; # fhir:experimental [ fhir:v false] ; # fhir:date [ fhir:v "2026-02-28"^^xsd:date] ; # fhir:publisher [ fhir:v "Michael J Osborne"] ; # fhir:contact ( [ fhir:name [ fhir:v "Michael J Osborne" ] ; fhir:telecom ( [ fhir:system [ fhir:v "url" ] ; fhir:value [ fhir:v "http://osbornemj.com" ] ] ) ] ) ; # fhir:description [ fhir:v "The OS LAB Microbiology Reports code system includes codes for reporting of microbiology results."] ; # fhir:jurisdiction ( [ fhir:coding ( [ fhir:system [ fhir:v "urn:iso:std:iso:3166"^^xsd:anyURI ; fhir:l ] ; fhir:code [ fhir:v "AUS" ] ; fhir:display [ fhir:v "Australia" ] ] ) ] ) ; # fhir:caseSensitive [ fhir:v false] ; # fhir:content [ fhir:v "complete"] ; # fhir:count [ fhir:v "23"^^xsd:nonNegativeInteger] ; # fhir:concept ( [ fhir:code [ fhir:v "ADFUNG" ] ; fhir:display [ fhir:v "Fungal Culture (M/C/S)" ] ; fhir:definition [ fhir:v "Fungal Culture (M/C/S)" ] ] [ fhir:code [ fhir:v "BC" ] ; fhir:display [ fhir:v "Blood Culture (M/C/S)" ] ; fhir:definition [ fhir:v "Blood Culture (M/C/S)" ] ] [ fhir:code [ fhir:v "CAS" ] ; fhir:display [ fhir:v "Candida auris Screen Culture" ] ; fhir:definition [ fhir:v "Candida auris Screen Culture" ] ] [ fhir:code [ fhir:v "CSF" ] ; fhir:display [ fhir:v "CSF Culture (M/C/S)" ] ; fhir:definition [ fhir:v "CSF Culture (M/C/S)" ] ] [ fhir:code [ fhir:v "CSFS" ] ; fhir:display [ fhir:v "CSF Subarachnoid Culture (M/C/S)" ] ; fhir:definition [ fhir:v "CSF Subarachnoid Culture (M/C/S)" ] ] [ fhir:code [ fhir:v "ENT" ] ; fhir:display [ fhir:v "Ear, Nose, Throat and Conjunctival Swab" ] ; fhir:definition [ fhir:v "Ear, Nose, Throat and Conjunctival Swab" ] ] [ fhir:code [ fhir:v "EYE" ] ; fhir:display [ fhir:v "Eye Invasive Culture (M/C/S)" ] ; fhir:definition [ fhir:v "Eye Invasive Culture (M/C/S)" ] ] [ fhir:code [ fhir:v "FAEMIC" ] ; fhir:display [ fhir:v "Faeces Microscopy (RBC,WBC) Only" ] ; fhir:definition [ fhir:v "Faeces Microscopy (RBC,WBC) Only" ] ] [ fhir:code [ fhir:v "FLBCM" ] ; fhir:display [ fhir:v "Sterile Fluid Culture in Blood Culture M" ] ; fhir:definition [ fhir:v "Sterile Fluid Culture in Blood Culture M" ] ] [ fhir:code [ fhir:v "FLPLUS" ] ; fhir:display [ fhir:v "Sterile Fluid Culture plus Fluid in Bloo" ] ; fhir:definition [ fhir:v "Sterile Fluid Culture plus Fluid in Bloo" ] ] [ fhir:code [ fhir:v "FLUID" ] ; fhir:display [ fhir:v "Sterile Fluid Culture (M/C/S)" ] ; fhir:definition [ fhir:v "Sterile Fluid Culture (M/C/S)" ] ] [ fhir:code [ fhir:v "FUNGI" ] ; fhir:display [ fhir:v "Skin, Hair, Nail Dermatophyte Culture (M" ] ; fhir:definition [ fhir:v "Skin, Hair, Nail Dermatophyte Culture (M" ] ] [ fhir:code [ fhir:v "GBS" ] ; fhir:display [ fhir:v "Group B Streptococcus Culture Screen (M/" ] ; fhir:definition [ fhir:v "Group B Streptococcus Culture Screen (M/" ] ] [ fhir:code [ fhir:v "GENIT" ] ; fhir:display [ fhir:v "Genital Swab Culture (M/C/S)" ] ; fhir:definition [ fhir:v "Genital Swab Culture (M/C/S)" ] ] [ fhir:code [ fhir:v "MRSA" ] ; fhir:display [ fhir:v "MRSA Screen Culture" ] ; fhir:definition [ fhir:v "MRSA Screen Culture" ] ] [ fhir:code [ fhir:v "PUS" ] ; fhir:display [ fhir:v "Deep Invasive Pus or Swab Culture (M/C/S" ] ; fhir:definition [ fhir:v "Deep Invasive Pus or Swab Culture (M/C/S" ] ] [ fhir:code [ fhir:v "RESP" ] ; fhir:display [ fhir:v "Respiratory Sputum or ETT Culture (M/C/S" ] ; fhir:definition [ fhir:v "Respiratory Sputum or ETT Culture (M/C/S" ] ] [ fhir:code [ fhir:v "RESPF" ] ; fhir:display [ fhir:v "Respiratory Bronchoscopic Collection Cul" ] ; fhir:definition [ fhir:v "Respiratory Bronchoscopic Collection Cul" ] ] [ fhir:code [ fhir:v "SITE" ] ; fhir:display [ fhir:v "Superficial Pus or Swab Culture (M/C/S)" ] ; fhir:definition [ fhir:v "Superficial Pus or Swab Culture (M/C/S)" ] ] [ fhir:code [ fhir:v "TIP" ] ; fhir:display [ fhir:v "Tip Culture (M/C/S)" ] ; fhir:definition [ fhir:v "Tip Culture (M/C/S)" ] ] [ fhir:code [ fhir:v "TIS" ] ; fhir:display [ fhir:v "Tissue Culture (M/C/S)" ] ; fhir:definition [ fhir:v "Tissue Culture (M/C/S)" ] ] [ fhir:code [ fhir:v "URINE" ] ; fhir:display [ fhir:v "Urine Culture (M/C/S)" ] ; fhir:definition [ fhir:v "Urine Culture (M/C/S)" ] ] [ fhir:code [ fhir:v "VRES" ] ; fhir:display [ fhir:v "VRE Screen Culture" ] ; fhir:definition [ fhir:v "VRE Screen Culture" ] ] ) . # # -------------------------------------------------------------------------------------